Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
SFB37709.1D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain. (322 aa)    
Predicted Functional Partners:
SFB37720.1
Regulator of RNase E activity RraA.
       0.775
SFB04966.1
Glyoxalase family protein.
    
  0.774
SFB37733.1
Protein of unknown function.
       0.773
SFB37744.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
    
  0.695
SFB37754.1
Putative tricarboxylic transport membrane protein.
       0.664
SFB37763.1
Tripartite tricarboxylate transporter TctB family protein.
       0.646
SFB35317.1
Aminotransferase.
 
  0.502
SFB37772.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.499
udk
Uridine kinase.
   
  0.479
SFA94820.1
Hypothetical protein.
   
  0.477
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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