STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES64578.1Cystathione beta-lyase. (390 aa)    
Predicted Functional Partners:
SET33701.1
Cystathionine gamma-lyase / homocysteine desulfhydrase.
 
 
 0.843
SET99371.1
Methionine synthase II (cobalamin-independent).
    
  0.814
SES66717.1
Cystathionine gamma-synthase.
 
 
 0.812
SET93607.1
O-acetylhomoserine (thiol)-lyase.
   
 0.712
secF
SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
    
  0.690
SES70980.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
 
  0.687
SET36436.1
NUDIX domain-containing protein; Belongs to the Nudix hydrolase family.
  
 
  0.656
SET55602.1
Predicted N-acyltransferase, GNAT family.
 
      0.640
SES89896.1
O-acetylhomoserine (thiol)-lyase.
    
 0.638
SET84388.1
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
    
  0.637
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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