STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET02249.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
SET02286.1
Hypothetical protein.
 
     0.953
SET02381.1
Phage major tail protein, phi13 family.
 
     0.947
SET02413.1
Hypothetical protein.
 
     0.941
SET01920.1
Phage portal protein, HK97 family.
 
     0.921
SET02067.1
Phage major capsid protein, HK97 family.
 
     0.920
SET01965.1
Hypothetical protein.
 
     0.902
SET01882.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
     0.864
SET02472.1
Phage-related minor tail protein.
 
     0.818
SET02168.1
Hypothetical protein.
       0.800
SET02210.1
Phage head-tail adaptor, putative, SPP1 family.
       0.800
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.