STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET34910.1Gluconate 5-dehydrogenase. (257 aa)    
Predicted Functional Partners:
SES68498.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.818
SET34885.1
acyl-CoA dehydrogenase.
  0.799
SET34958.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
   0.764
SES70895.1
PTS system, trehalose-specific IIC component.
     
 0.730
SET13952.1
PTS system, D-glucosamine-specific IIC component.
     
 0.730
SET34863.1
MaoC like domain-containing protein.
 
  0.692
SET79370.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.686
SET46973.1
PTS system, fructose-specific IIC component.
   
 0.676
SET34838.1
Acyl dehydratase.
 
  0.665
SET34935.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.664
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.