STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET32683.1YqfQ-like protein. (209 aa)    
Predicted Functional Partners:
SET21127.1
Stage VI sporulation protein F.
  
    0.804
SET89920.1
Stage VI sporulation protein F.
  
    0.798
SET85985.1
Putative coat protein.
  
    0.783
SEU03215.1
Protein of unknown function.
  
     0.774
SET61578.1
Conserved membrane protein YqhR.
  
     0.773
SEU06410.1
Spore cortex biosynthesis protein YabQ.
  
     0.772
SEU08659.1
Stage VI sporulation protein D.
  
     0.770
SES65145.1
Spore coat protein YutH.
  
    0.768
SET79524.1
Hypothetical protein.
  
     0.768
SET13389.1
Inhibitor of the pro-sigma K processing machinery.
  
     0.765
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.