STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET50124.1Cytochrome d ubiquinol oxidase subunit I. (448 aa)    
Predicted Functional Partners:
SET50076.1
Cytochrome d ubiquinol oxidase subunit II.
 
 
 0.999
SET50155.1
Hypothetical protein.
       0.737
SET77768.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
  
  
 0.711
SET99234.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
  
 0.692
SET77726.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
  
 0.691
SET77793.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
  
  
 0.668
SEU09998.1
Proline dehydrogenase.
  
  
 0.627
nuoA
NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
     
 0.601
SES64828.1
NADH dehydrogenase.
 
   
 0.539
SET35377.1
NADH dehydrogenase.
 
   
 0.535
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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