STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET51463.1Major Facilitator Superfamily protein. (401 aa)    
Predicted Functional Partners:
SET94144.1
DinB superfamily protein.
  
     0.633
SET97998.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
  
     0.615
SET36436.1
NUDIX domain-containing protein; Belongs to the Nudix hydrolase family.
  
     0.601
SET51252.1
Transmembrane secretion effector.
  
    0.579
SET70728.1
Transmembrane secretion effector.
  
    0.506
SET51217.1
Transmembrane secretion effector.
  
    0.470
SET72993.1
Predicted arabinose efflux permease, MFS family.
  
   
 0.447
SET90095.1
Heptaprenyl diphosphate synthase.
  
  
  0.439
SET21742.1
Peroxiredoxin, SACOL1771 subfamily.
  
     0.432
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.