Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SES98905.1 | SET51604.1 | SAMN05421676_102285 | SAMN05421676_105158 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.537 |
| SET33733.1 | SET51604.1 | SAMN05421676_10484 | SAMN05421676_105158 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.548 |
| SET51563.1 | SET51604.1 | SAMN05421676_105157 | SAMN05421676_105158 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.773 |
| SET51604.1 | SES98905.1 | SAMN05421676_105158 | SAMN05421676_102285 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.537 |
| SET51604.1 | SET33733.1 | SAMN05421676_105158 | SAMN05421676_10484 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.548 |
| SET51604.1 | SET51563.1 | SAMN05421676_105158 | SAMN05421676_105157 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.773 |
| SET51604.1 | SET63138.1 | SAMN05421676_105158 | SAMN05421676_106136 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.515 |
| SET51604.1 | SET90199.1 | SAMN05421676_105158 | SAMN05421676_11093 | RNA polymerase sigma-70 factor, ECF subfamily. | Chemotaxis protein methyltransferase CheR. | 0.559 |
| SET51604.1 | SET96808.1 | SAMN05421676_105158 | SAMN05421676_112106 | RNA polymerase sigma-70 factor, ECF subfamily. | Transmembrane transcriptional regulator (anti-sigma factor RsiW). | 0.589 |
| SET51604.1 | rpoA | SAMN05421676_105158 | SAMN05421676_11461 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.538 |
| SET51604.1 | rpoB | SAMN05421676_105158 | SAMN05421676_11426 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.603 |
| SET51604.1 | rpoC | SAMN05421676_105158 | SAMN05421676_11427 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.642 |
| SET51604.1 | rpoZ | SAMN05421676_105158 | SAMN05421676_10949 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.538 |
| SET63138.1 | SET51604.1 | SAMN05421676_106136 | SAMN05421676_105158 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.515 |
| SET90199.1 | SET51604.1 | SAMN05421676_11093 | SAMN05421676_105158 | Chemotaxis protein methyltransferase CheR. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.559 |
| SET96808.1 | SET51604.1 | SAMN05421676_112106 | SAMN05421676_105158 | Transmembrane transcriptional regulator (anti-sigma factor RsiW). | RNA polymerase sigma-70 factor, ECF subfamily. | 0.589 |
| rpoA | SET51604.1 | SAMN05421676_11461 | SAMN05421676_105158 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.538 |
| rpoA | rpoB | SAMN05421676_11461 | SAMN05421676_11426 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoC | SAMN05421676_11461 | SAMN05421676_11427 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoZ | SAMN05421676_11461 | SAMN05421676_10949 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
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