STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET47188.1Lichenan operon transcriptional antiterminator. (646 aa)    
Predicted Functional Partners:
SET46973.1
PTS system, fructose-specific IIC component.
 
 
 0.975
SET51997.1
PTS system, mannitol-specific IIC component.
 
 
0.954
SET47332.1
PTS system, cellobiose-specific IIB component.
 
  
 0.942
SET47271.1
PTS system, cellobiose-specific IIA component.
 
  
 0.941
SET47304.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.940
SES70895.1
PTS system, trehalose-specific IIC component.
 
 0.934
SET46995.1
Activator of the mannose operon, transcriptional antiterminator.
 
 
 0.933
SET54180.1
PTS system, galactitol-specific IIB component.
 
 
 0.932
SET13952.1
PTS system, D-glucosamine-specific IIC component.
 
 0.929
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
 
 0.927
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.