STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET94743.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
SET94702.1
Hypothetical protein.
       0.800
SET94725.1
Minor capsid protein.
       0.800
SET94683.1
Hypothetical protein.
       0.785
SET94763.1
Hypothetical protein.
       0.773
SET94782.1
Hypothetical protein.
       0.768
SET94798.1
Hypothetical protein.
       0.768
SET94668.1
Hypothetical protein.
       0.752
SET94819.1
Phage major capsid protein, HK97 family.
       0.590
SET94838.1
Hypothetical protein.
       0.558
SET94655.1
Hypothetical protein.
       0.557
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.