STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU06365.1S1 RNA binding domain protein. (129 aa)    
Predicted Functional Partners:
SES70895.1
PTS system, trehalose-specific IIC component.
    
  0.743
SET13952.1
PTS system, D-glucosamine-specific IIC component.
    
  0.743
SEU06390.1
Cell division protein DivIC.
 
    0.742
SET79370.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.714
SEU06484.1
Polysaccharide transporter, PST family.
 
     0.625
SEU06410.1
Spore cortex biosynthesis protein YabQ.
     
 0.620
SEU06435.1
Sporulation protein YabP.
       0.618
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
  0.601
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.576
SET23485.1
Fructose-bisphosphate aldolase, class II.
   
 
  0.568
Your Current Organism:
Salinibacillus kushneri
NCBI taxonomy Id: 237682
Other names: AS 1.3566, Bacillaceae bacterium 8-2, Bacillaceae bacterium W11-1, JCM 12390, S. kushneri, Salinibacillus kushneri Ren and Zhou 2005, strain 8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.