Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ27884.1 | EAQ28388.1 | NAP1_09827 | NAP1_12353 | COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.623 |
EAQ27884.1 | EAQ29157.1 | NAP1_09827 | NAP1_00255 | COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. | Hypothetical protein. | 0.408 |
EAQ28388.1 | EAQ27884.1 | NAP1_12353 | NAP1_09827 | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. | 0.623 |
EAQ28388.1 | EAQ29157.1 | NAP1_12353 | NAP1_00255 | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.455 |
EAQ29155.1 | EAQ29157.1 | NAP1_00245 | NAP1_00255 | GTP-binding protein EngA. | Hypothetical protein. | 0.629 |
EAQ29155.1 | der | NAP1_00245 | NAP1_00250 | GTP-binding protein EngA. | Predicted GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.858 |
EAQ29157.1 | EAQ27884.1 | NAP1_00255 | NAP1_09827 | Hypothetical protein. | COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family. | 0.408 |
EAQ29157.1 | EAQ28388.1 | NAP1_00255 | NAP1_12353 | Hypothetical protein. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.455 |
EAQ29157.1 | EAQ29155.1 | NAP1_00255 | NAP1_00245 | Hypothetical protein. | GTP-binding protein EngA. | 0.629 |
EAQ29157.1 | der | NAP1_00255 | NAP1_00250 | Hypothetical protein. | Predicted GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.646 |
der | EAQ29155.1 | NAP1_00250 | NAP1_00245 | Predicted GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | GTP-binding protein EngA. | 0.858 |
der | EAQ29157.1 | NAP1_00250 | NAP1_00255 | Predicted GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Hypothetical protein. | 0.646 |