STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ30722.1Putative protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. (537 aa)    
Predicted Functional Partners:
EAQ30351.1
COG3637 Opacity protein and related surface antigens.
    
 
 0.902
EAQ30352.1
COG3637 Opacity protein and related surface antigens.
    
 
 0.902
EAQ28353.1
COG3637 Opacity protein and related surface antigens.
    
 
 0.902
EAQ30723.1
Hypothetical protein.
       0.773
EAQ29115.1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.768
EAQ29178.1
COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily.
   
  0.735
EAQ29546.1
COG2020 Putative protein-S-isoprenylcysteine methyltransferase.
  
     0.714
EAQ30016.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 0.709
EAQ28736.1
Hypothetical protein.
  
     0.700
EAQ29251.1
Hypothetical protein.
  
     0.669
Your Current Organism:
Erythrobacter sp. NAP1
NCBI taxonomy Id: 237727
Other names: E. sp. NAP1
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