STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27756.1Type IV secretion system protein B3, putative; COG3702 Type IV secretory pathway, VirB3 components. (94 aa)    
Predicted Functional Partners:
EAQ27755.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
 
 0.997
EAQ27754.1
Hypothetical protein; COG3704 Type IV secretory pathway, VirB6 components.
 
  
 0.991
EAQ27753.1
Type IV secretion system protein B9, putative; COG3504 Type IV secretory pathway, VirB9 components.
 
  
 0.989
EAQ27752.1
Type IV secretion system protein B10, putative; COG2948 Type IV secretory pathway, VirB10 components.
 
  
 0.988
EAQ27757.1
Hypothetical protein; COG3838 Type IV secretory pathway, VirB2 components (pilins).
 
   
 0.960
EAQ29793.1
TraC; COG3451 Type IV secretory pathway, VirB4 components.
  
 
 0.953
EAQ27751.1
Type IV secretion system protein B11, putative; Part of the Type IV secretion system. Belongs to the GSP E family.
 
     0.846
EAQ28090.1
Hypothetical protein; COG5572 Predicted integral membrane protein.
   
    0.748
EAQ28835.1
Hypothetical protein; COG5572 Predicted integral membrane protein.
   
    0.748
EAQ28089.1
COG3220 Uncharacterized protein conserved in bacteria; Belongs to the UPF0276 family.
   
    0.681
Your Current Organism:
Erythrobacter sp. NAP1
NCBI taxonomy Id: 237727
Other names: E. sp. NAP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.