STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ27867.1Hypothetical protein; COG2273 Beta-glucanase/Beta-glucan synthetase. (341 aa)    
Predicted Functional Partners:
EAQ27864.1
1,4-beta-D-glucan glucohydrolase D; COG1472 Beta-glucosidase-related glycosidases.
 
 0.907
EAQ27866.1
Transcriptional regulator, LacI family protein; COG1609 Transcriptional regulators.
 
     0.877
EAQ27868.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.794
EAQ27869.1
Tryptophan halogenase, putative; COG0644 Dehydrogenases (flavoproteins).
 
     0.774
EAQ27865.1
Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily.
 
     0.761
EAQ27862.1
Tryptophan halogenase, putative; COG0644 Dehydrogenases (flavoproteins).
 
     0.627
EAQ27859.1
Tryptophan halogenase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
     0.616
EAQ27863.1
Putative sodium/hexose cotransport protein; COG4146 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.543
EAQ29188.1
Bacteriophage N4 adsorption protein B; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
    
  0.527
EAQ29017.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
     
 0.469
Your Current Organism:
Erythrobacter sp. NAP1
NCBI taxonomy Id: 237727
Other names: E. sp. NAP1
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