STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ28191.1ABC-transporter permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component. (378 aa)    
Predicted Functional Partners:
EAQ28193.1
COG0845 Membrane-fusion protein.
 
  
 0.974
EAQ28192.1
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.963
EAQ28194.1
RND efflux system, outer membrane lipoprotein, NodT; COG1538 Outer membrane protein.
 
   0.872
lolD
Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.727
EAQ27671.1
ABC transporter related; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 0.696
EAQ28190.1
Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
 
     0.633
EAQ29755.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.576
EAQ29807.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.544
EAQ27670.1
Secretion protein HlyD; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.536
EAQ27817.1
COG0845 Membrane-fusion protein.
  
  
 0.526
Your Current Organism:
Erythrobacter sp. NAP1
NCBI taxonomy Id: 237727
Other names: E. sp. NAP1
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