Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ27652.1 | EAQ27653.1 | NAP1_08667 | NAP1_08672 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | 0.936 |
EAQ27652.1 | EAQ27833.1 | NAP1_08667 | NAP1_09572 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain. | 0.690 |
EAQ27652.1 | EAQ28509.1 | NAP1_08667 | NAP1_12958 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | Hypothetical protein. | 0.742 |
EAQ27652.1 | EAQ28510.1 | NAP1_08667 | NAP1_12963 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | COG3121 P pilus assembly protein, chaperone PapD. | 0.723 |
EAQ27652.1 | EAQ28805.1 | NAP1_08667 | NAP1_14438 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | Hypothetical protein. | 0.717 |
EAQ27652.1 | EAQ29333.1 | NAP1_08667 | NAP1_01135 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | 0.732 |
EAQ27652.1 | EAQ29793.1 | NAP1_08667 | NAP1_03435 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | TraC; COG3451 Type IV secretory pathway, VirB4 components. | 0.579 |
EAQ27652.1 | EAQ29871.1 | NAP1_08667 | NAP1_03825 | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | Hypothetical protein; COG5295 Autotransporter adhesin. | 0.417 |
EAQ27653.1 | EAQ27652.1 | NAP1_08672 | NAP1_08667 | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.936 |
EAQ27653.1 | EAQ27833.1 | NAP1_08672 | NAP1_09572 | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain. | 0.733 |
EAQ27653.1 | EAQ28509.1 | NAP1_08672 | NAP1_12958 | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | Hypothetical protein. | 0.720 |
EAQ27653.1 | EAQ28510.1 | NAP1_08672 | NAP1_12963 | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | COG3121 P pilus assembly protein, chaperone PapD. | 0.667 |
EAQ27653.1 | EAQ28805.1 | NAP1_08672 | NAP1_14438 | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | Hypothetical protein. | 0.498 |
EAQ27653.1 | EAQ29332.1 | NAP1_08672 | NAP1_01130 | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.573 |
EAQ27653.1 | EAQ29870.1 | NAP1_08672 | NAP1_03820 | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | Hypothetical protein. | 0.624 |
EAQ27833.1 | EAQ27652.1 | NAP1_09572 | NAP1_08667 | Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.690 |
EAQ27833.1 | EAQ27653.1 | NAP1_09572 | NAP1_08672 | Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Hypothetical protein; COG2831 Hemolysin activation/secretion protein. | 0.733 |
EAQ27833.1 | EAQ28509.1 | NAP1_09572 | NAP1_12958 | Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Hypothetical protein. | 0.791 |
EAQ27833.1 | EAQ28510.1 | NAP1_09572 | NAP1_12963 | Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain. | COG3121 P pilus assembly protein, chaperone PapD. | 0.688 |
EAQ27833.1 | EAQ28805.1 | NAP1_09572 | NAP1_14438 | Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain. | Hypothetical protein. | 0.710 |
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