STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ28509.1Hypothetical protein. (926 aa)    
Predicted Functional Partners:
EAQ28510.1
COG3121 P pilus assembly protein, chaperone PapD.
 
 
 0.995
EAQ27833.1
Cytochrome c family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
  
    0.791
EAQ29332.1
Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
  
 0.777
EAQ28805.1
Hypothetical protein.
 
     0.777
EAQ29871.1
Hypothetical protein; COG5295 Autotransporter adhesin.
  
     0.768
EAQ29333.1
Hypothetical protein; COG2831 Hemolysin activation/secretion protein.
  
  
 0.759
EAQ27652.1
Outer membrane autotransporter barrel protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.742
EAQ29793.1
TraC; COG3451 Type IV secretory pathway, VirB4 components.
  
    0.726
EAQ29870.1
Hypothetical protein.
  
     0.726
EAQ27653.1
Hypothetical protein; COG2831 Hemolysin activation/secretion protein.
  
  
 0.720
Your Current Organism:
Erythrobacter sp. NAP1
NCBI taxonomy Id: 237727
Other names: E. sp. NAP1
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