STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ28719.1COG4206 Outer membrane cobalamin receptor protein. (629 aa)    
Predicted Functional Partners:
EAQ28845.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.537
EAQ28717.1
Hypothetical protein; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.529
EAQ28718.1
Similar to protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase; COG2133 Glucose/sorbosone dehydrogenases.
       0.529
EAQ29223.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.497
EAQ27667.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.491
EAQ30543.1
ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.477
EAQ28765.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.463
EAQ28991.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.449
EAQ30544.1
COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
     0.432
EAQ27607.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.430
Your Current Organism:
Erythrobacter sp. NAP1
NCBI taxonomy Id: 237727
Other names: E. sp. NAP1
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