STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQX10995.1Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. (240 aa)    
Predicted Functional Partners:
AQX10994.1
Nitric oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.899
AQX10993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
AQX11002.1
Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.841
AQX10997.1
Electron transporter SenC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.683
AQX10999.1
Nitrite reductase, copper-containing; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.649
AQX10998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.588
AQX10996.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
AQX11001.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.522
AQX11000.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.504
AQX12292.1
phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.492
Your Current Organism:
Elizabethkingia meningoseptica
NCBI taxonomy Id: 238
Other names: ATCC 13253, CCUG 214, CIP 60.57, Chryseobacterium (Flavobacterium) meningosepticum, Chryseobacterium meningosepticum, DSM 2800, E. meningoseptica, Flavobacterium menginosepticum, Flavobacterium meningosepticum, IAM 14198, IFO 12535, JCM 21065, LMG 12279, LMG:12279, NBRC 12535, NCTC 10016
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