STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQX12609.1Silent information regulator protein Sir2; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)    
Predicted Functional Partners:
AQX12610.1
Silent information regulator protein Sir2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.706
AQX12612.1
Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.704
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.701
AQX13844.1
Glucuronyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.593
AQX13968.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.580
AQX12608.1
DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.554
AQX13951.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.544
AQX11103.1
Nematoblast specific protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.513
AQX12308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
AQX12256.1
Sialidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.458
Your Current Organism:
Elizabethkingia meningoseptica
NCBI taxonomy Id: 238
Other names: ATCC 13253, CCUG 214, CIP 60.57, Chryseobacterium (Flavobacterium) meningosepticum, Chryseobacterium meningosepticum, DSM 2800, E. meningoseptica, Flavobacterium menginosepticum, Flavobacterium meningosepticum, IAM 14198, IFO 12535, JCM 21065, LMG 12279, LMG:12279, NBRC 12535, NCTC 10016
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