Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQX12651.1Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)    
Predicted Functional Partners:
AQX12650.1
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.
       0.825
AQX12352.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
AQX13671.1
Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
AQX13881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
AQX13591.1
Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
AQX11386.1
Aminodeoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
fbp
Fructose-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.
       0.579
AQX14247.1
DNA mismatch repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
AQX12088.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
AQX13986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
Your Current Organism:
Elizabethkingia meningoseptica
NCBI taxonomy Id: 238
Other names: ATCC 13253, CCUG 214, CIP 60.57, Chryseobacterium (Flavobacterium) meningosepticum, Chryseobacterium meningosepticum, DSM 2800, E. meningoseptica, Flavobacterium menginosepticum, Flavobacterium meningosepticum, IAM 14198, IFO 12535, JCM 21065, LMG 12279, LMG:12279, NBRC 12535, NCTC 10016
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