STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXP14485.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1346 aa)    
Predicted Functional Partners:
KXP14486.1
DNA methylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.954
KXP14489.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
KXP14487.1
Phage resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.799
KXP14488.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.799
KXP14491.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
KXP15128.1
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.531
KXP14731.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.524
KXP14964.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.500
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.498
KXP14588.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.497
Your Current Organism:
Tsukamurella pseudospumae
NCBI taxonomy Id: 239498
Other names: DSM 44118, JCM 13375, JCM 15929 [[Tsukamurella sunchonensis]], KCTC 9827 [[Tsukamurella sunchonensis]], NCIMB 13963, NRRL B-24668 [[Tsukamurella sunchonensis]], T. pseudospumae, Tsukamurella pseudospumae Nam et al. 2004 emend. Teng et al. 2016, Tsukamurella sp. SCNU5, Tsukamurella sp. U5, Tsukamurella sunchonensis, Tsukamurella sunchonensis Seong et al. 2008, strain N1176, strain SCNU5 [[Tsukamurella sunchonensis]]
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