ACP_0010 protein (Acidobacterium capsulatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACP_0010

Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409. (815 aa)

Predicted Functional Partners:

ACP_0009

0.878

ACP_2429

0.646

ACP_1347

0.611

ACP_0866

0.560

ACP_0029

0.559

fucP

0.557

ACP_3025

0.543

ACP_3277

0.529

gtaA

0.496

ACP_1268

0.495

Your Current Organism:

Acidobacterium capsulatum

NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACP_0009	ACP_0010	ACP_0009	ACP_0010	Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	0.878
ACP_0009	ACP_0866	ACP_0009	ACP_0866	Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.	alpha-L-fucosidase; Identified by match to protein family HMM PF01120.	0.614
ACP_0009	ACP_1347	ACP_0009	ACP_1347	Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.	Tat pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	0.716
ACP_0009	ACP_2429	ACP_0009	ACP_2429	Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.	Glycosyl hydrolase, family 2; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.	0.582
ACP_0009	gtaA	ACP_0009	ACP_2528	Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.	Identified by similarity to GB:BAA86934.1; match to protein family HMM PF08760.	0.611
ACP_0010	ACP_0009	ACP_0010	ACP_0009	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.	0.878
ACP_0010	ACP_0029	ACP_0010	ACP_0029	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00728; match to protein family HMM PF02838.	0.559
ACP_0010	ACP_0866	ACP_0010	ACP_0866	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	alpha-L-fucosidase; Identified by match to protein family HMM PF01120.	0.560
ACP_0010	ACP_1268	ACP_0010	ACP_1268	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Hypothetical protein; Identified by glimmer; putative.	0.495
ACP_0010	ACP_1347	ACP_0010	ACP_1347	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Tat pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	0.611
ACP_0010	ACP_2429	ACP_0010	ACP_2429	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Glycosyl hydrolase, family 2; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.	0.646
ACP_0010	ACP_3025	ACP_0010	ACP_3025	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Sugar MFS transporter, fucose:H+ symporter (FHS) family; Identified by similarity to SP:Q44623; match to protein family HMM PF07690; match to protein family HMM TIGR01272.	0.543
ACP_0010	ACP_3277	ACP_0010	ACP_3277	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Dipeptidyl peptidase, putative; Identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930.	0.529
ACP_0010	fucP	ACP_0010	ACP_3279	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Fucose: H+ symporter permease; Identified by similarity to SP:P11551; match to protein family HMM PF07690; match to protein family HMM TIGR00885.	0.557
ACP_0010	gtaA	ACP_0010	ACP_2528	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	Identified by similarity to GB:BAA86934.1; match to protein family HMM PF08760.	0.496
ACP_0029	ACP_0010	ACP_0029	ACP_0010	Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00728; match to protein family HMM PF02838.	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	0.559
ACP_0029	ACP_0866	ACP_0029	ACP_0866	Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00728; match to protein family HMM PF02838.	alpha-L-fucosidase; Identified by match to protein family HMM PF01120.	0.425
ACP_0029	ACP_2429	ACP_0029	ACP_2429	Glycosyl hydrolase, family 20; Identified by match to protein family HMM PF00728; match to protein family HMM PF02838.	Glycosyl hydrolase, family 2; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.	0.557
ACP_0866	ACP_0009	ACP_0866	ACP_0009	alpha-L-fucosidase; Identified by match to protein family HMM PF01120.	Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409.	0.614
ACP_0866	ACP_0010	ACP_0866	ACP_0010	alpha-L-fucosidase; Identified by match to protein family HMM PF01120.	Putative alpha-1,2-mannosidase; Identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409.	0.560

page 1 of 3

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About