STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (700 aa)    
Predicted Functional Partners:
flhB
Flagellar biosynthetic protein FlhB; Identified by similarity to SP:P40727; match to protein family HMM PF01312.
 
 0.999
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.996
fliQ
Flagellar biosynthetic protein FliQ; Identified by similarity to SP:P35535; match to protein family HMM PF01313.
 
  
 0.996
fliR
Flagellar biosynthetic protein FliR; Identified by match to protein family HMM PF01311; match to protein family HMM TIGR01400.
 
  
 0.996
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.990
fliG
Flagellar motor switch protein FliG; Identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207.
 
  
 0.984
ACP_0252
Putative flagellar motor switch protein FliN; Identified by match to protein family HMM PF01052.
 
  
 0.981
fliS
Flagellar protein FliS; Identified by match to protein family HMM TIGR00208.
 
 
 0.980
fliI
Flagellar protein export ATPase FliI; Identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; match to protein family HMM TIGR03496.
 
 
 0.976
flgK
Flagellar hook-associated protein FlgK; Identified by similarity to SP:P33235; match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492.
 
  
 0.970
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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