STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_0301Conserved domain protein. (180 aa)    
Predicted Functional Partners:
ACP_1085
Hypothetical protein; Identified by glimmer; putative.
  
     0.744
ACP_2797
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
  
     0.744
ACP_1574
IPT/TIG domain protein; Identified by match to protein family HMM PF01833.
  
     0.737
ACP_0984
Conserved hypothetical protein.
  
     0.727
ACP_0537
Hypothetical protein; Identified by glimmer; putative.
  
     0.717
ACP_1484
Putative lipoprotein.
  
     0.713
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.705
ACP_3384
Glycosyl hydrolase, family 52.
  
     0.682
ACP_0011
Fusaric acid resistance domain protein; Identified by similarity to SP:P32715.
  
     0.679
ACP_3220
Hypothetical protein; Identified by glimmer; putative.
  
     0.665
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.