STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_0502tolB protein, putative; Identified by similarity to SP:P19935; match to protein family HMM PF07676; match to protein family HMM TIGR02800. (465 aa)    
Predicted Functional Partners:
pal
Identified by match to protein family HMM PF00691; Belongs to the Pal lipoprotein family.
 
 
 0.928
ACP_0500
Transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB) family.
 
  
 0.908
ACP_0505
Transporter, MotA/TolQ/ExbB proton channel family; Identified by match to protein family HMM PF01618.
 
  
 0.891
ACP_0503
Identified by match to protein family HMM TIGR01352.
 
 
 
 0.838
ACP_0504
Transport energizing protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
 
  
 0.837
ACP_1393
Identified by match to protein family HMM PF00691.
 
 
 0.803
ACP_2136
Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.
 
  
 0.701
ACP_2137
Transport energizing protein, ExbD/TolR family; Identified by similarity to SP:Q05606; match to protein family HMM PF02472.
 
  
 0.669
ACP_2768
Lipoprotein releasing system, transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687.
  
  
 0.661
ACP_2584
Tetratricopeptide repeat protein.
  
   
 0.654
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.