Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ACP_0273 | ACP_0550 | Conserved hypothetical protein. | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | 0.793 |
ACP_0273 | ACP_0551 | Conserved hypothetical protein. | Glycosyl hydrolase family 88 protein; Identified by match to protein family HMM PF07470. | 0.745 |
ACP_0273 | ACP_0553 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.598 |
ACP_0273 | ACP_1269 | Conserved hypothetical protein. | Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF07944; match to protein family HMM TIGR01409. | 0.630 |
ACP_0273 | ACP_2677 | Conserved hypothetical protein. | Endo-polygalacturonase/pectinesterase; Identified by match to protein family HMM PF00295; match to protein family HMM PF01095. | 0.782 |
ACP_0273 | ACP_2692 | Conserved hypothetical protein. | Putative pectinesterase; Identified by match to protein family HMM PF01095. | 0.772 |
ACP_0273 | ACP_2735 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by similarity to GB:AAM39029.1. | 0.561 |
ACP_0273 | ACP_2739 | Conserved hypothetical protein. | Putative glycosyl hydrolase; Identified by match to protein family HMM PF02837. | 0.585 |
ACP_0550 | ACP_0273 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Conserved hypothetical protein. | 0.793 |
ACP_0550 | ACP_0551 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Glycosyl hydrolase family 88 protein; Identified by match to protein family HMM PF07470. | 0.878 |
ACP_0550 | ACP_0553 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Conserved hypothetical protein. | 0.864 |
ACP_0550 | ACP_0554 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Glycosyl hydrolase, family 28; Identified by match to protein family HMM PF00295; Belongs to the glycosyl hydrolase 28 family. | 0.965 |
ACP_0550 | ACP_1269 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Tat pathway signal sequence domain protein; Identified by match to protein family HMM PF07944; match to protein family HMM TIGR01409. | 0.653 |
ACP_0550 | ACP_2677 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Endo-polygalacturonase/pectinesterase; Identified by match to protein family HMM PF00295; match to protein family HMM PF01095. | 0.831 |
ACP_0550 | ACP_2679 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Polygalacturonase; Identified by match to protein family HMM PF00295; Belongs to the glycosyl hydrolase 28 family. | 0.976 |
ACP_0550 | ACP_2692 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Putative pectinesterase; Identified by match to protein family HMM PF01095. | 0.824 |
ACP_0550 | ACP_2735 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Conserved hypothetical protein; Identified by similarity to GB:AAM39029.1. | 0.756 |
ACP_0550 | ACP_2739 | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | Putative glycosyl hydrolase; Identified by match to protein family HMM PF02837. | 0.676 |
ACP_0551 | ACP_0273 | Glycosyl hydrolase family 88 protein; Identified by match to protein family HMM PF07470. | Conserved hypothetical protein. | 0.745 |
ACP_0551 | ACP_0550 | Glycosyl hydrolase family 88 protein; Identified by match to protein family HMM PF07470. | Lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657. | 0.878 |
page 1 of 5