STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_0751Glycosyl transferase, group 1 family; Identified by match to protein family HMM PF00534. (419 aa)    
Predicted Functional Partners:
tuaD
UDP-glucose 6-dehydrogenase; Identified by similarity to SP:O32271; match to protein family HMM PF00070; match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026.
 
  
 0.729
ACP_0752
Conserved domain protein.
 
    0.679
treZ
4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.
   
 0.630
ACP_2175
Glycosyl transferase, group 1 family; Identified by match to protein family HMM PF00534.
 
     0.628
ACP_0755
Chain length determinant family protein; Identified by match to protein family HMM PF02706.
 
  
 0.498
ACP_0749
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
    0.483
ACP_2588
Glycosyl transferase, group 1 family; Identified by match to protein family HMM PF00534.
  
     0.461
ACP_0826
Chain length determinant family protein; Identified by match to protein family HMM PF02706.
 
  
 0.448
ACP_1162
Nonribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733.
    
 
 0.439
ACP_0465
Flippase domain protein; Identified by similarity to PIR:E85829.
 
  
 0.436
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.