STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_0840Putative membrane protein. (234 aa)    
Predicted Functional Partners:
ACP_0841
Conserved hypothetical protein.
 
     0.910
ACP_0354
Hypothetical protein; Identified by glimmer; putative.
  
    0.666
ACP_0842
Trehalose synthase/probable maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457.
  
    0.626
glgE
Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
    0.555
ACP_0503
Identified by match to protein family HMM TIGR01352.
  
    0.528
ACP_0984
Conserved hypothetical protein.
  
     0.526
ACP_0516
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072.
  
     0.504
ACP_2041
Hypothetical protein; Identified by glimmer; putative.
 
    0.487
ACP_2324
Gas vesicle protein, GvpL/GvpF family; Identified by match to protein family HMM PF06386.
  
     0.469
ACP_2951
Putative lipoprotein.
  
     0.467
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.