STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_0910Cna protein B-type domain protein; Identified by match to protein family HMM PF05738. (1261 aa)    
Predicted Functional Partners:
ACP_2157
Hypothetical protein; Identified by glimmer; putative.
  
    0.782
ACP_2051
Hypothetical protein; Identified by glimmer; putative.
  
     0.768
ACP_0219
Hypothetical protein; Identified by glimmer; putative.
  
    0.765
ACP_1873
BNR/Asp-box repeat protein; Identified by match to protein family HMM PF02012.
  
 
   0.765
ACP_1367
Hypothetical protein; Identified by glimmer; putative.
  
    0.763
ACP_1890
Hypothetical protein; Identified by glimmer; putative.
  
     0.761
ACP_1847
Hypothetical protein; Identified by glimmer; putative.
  
     0.760
ACP_2773
Hypothetical protein; Identified by glimmer; putative.
  
     0.759
ACP_0061
TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.756
ACP_1775
Hypothetical protein; Identified by glimmer; putative.
  
     0.754
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.