Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP_1024Conserved hypothetical protein; Identified by similarity to GB:AAT32910.1. (419 aa)    
Predicted Functional Partners:
ACP_1021
Peptidase family M22, nonpeptidase homolog; Identified by match to protein family HMM PF00814.
       0.417
ACP_1022
methylmalonyl-CoA epimerase; Identified by similarity to SP:Q96PE7; match to protein family HMM PF00903; match to protein family HMM TIGR03081.
       0.417
ACP_1023
LAO/AO transport system ATPase; Identified by match to protein family HMM PF03308; match to protein family HMM TIGR00750.
       0.417
ACP_1020
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.405
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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