Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACP_1063 | ACP_1064 | ACP_1063 | ACP_1064 | Hypothetical protein; Identified by glimmer; putative. | Putative methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.658 |
| ACP_1063 | ACP_1066 | ACP_1063 | ACP_1066 | Hypothetical protein; Identified by glimmer; putative. | DHH family/DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | 0.447 |
| ACP_1063 | rbfA | ACP_1063 | ACP_1065 | Hypothetical protein; Identified by glimmer; putative. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.447 |
| ACP_1064 | ACP_1063 | ACP_1064 | ACP_1063 | Putative methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Hypothetical protein; Identified by glimmer; putative. | 0.658 |
| ACP_1064 | ACP_1066 | ACP_1064 | ACP_1066 | Putative methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | DHH family/DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | 0.516 |
| ACP_1064 | rbfA | ACP_1064 | ACP_1065 | Putative methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.516 |
| ACP_1066 | ACP_1063 | ACP_1066 | ACP_1063 | DHH family/DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Hypothetical protein; Identified by glimmer; putative. | 0.447 |
| ACP_1066 | ACP_1064 | ACP_1066 | ACP_1064 | DHH family/DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Putative methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.516 |
| ACP_1066 | rbfA | ACP_1066 | ACP_1065 | DHH family/DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.929 |
| rbfA | ACP_1063 | ACP_1065 | ACP_1063 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Hypothetical protein; Identified by glimmer; putative. | 0.447 |
| rbfA | ACP_1064 | ACP_1065 | ACP_1064 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Putative methyltransferase, TIGR00027 family; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.516 |
| rbfA | ACP_1066 | ACP_1065 | ACP_1066 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | DHH family/DHHA1 domain protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. | 0.929 |