STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_1072DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281. (203 aa)    
Predicted Functional Partners:
ACP_1073
Histidine kinase domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
  0.996
ACP_3537
Two-component sensor histidine kinase; Identified by match to protein family HMM PF01336; match to protein family HMM PF02518; match to protein family HMM PF07730.
  
   0.827
ACP_1327
Two-component system sensor protein, putative; Identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730.
 
 
 0.820
ACP_1323
Two-component system sensor protein, putative; Identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730.
 
 
 0.816
ACP_2112
Two component regulator propeller/histidine kinase domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730.
 
 
 0.810
ACP_1291
Two component regulator propeller/histidine kinase domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730.
 
 
 0.804
narP
Two-component response regulator; Identified by match to protein family HMM PF00196.
  
     0.766
ACP_1074
ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
 
   
 0.734
ACP_1075
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    0.699
ACP_0703
EAL domain/histidine kinase domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF02518; match to protein family HMM PF07730.
 
 
 0.608
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.