STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_1308Transporter, MFP family; Identified by match to protein family HMM PF00529. (383 aa)    
Predicted Functional Partners:
ACP_1307
The Drug:H+ Antiporter-2 (14 Spanner) (DHA2) Family is a member of the Major Facilitator Superfamily (MFS); identified by match to protein family HMM PF07690.
 
   0.935
ACP_1306
Outer membrane efflux protein family; Identified by match to protein family HMM PF02321.
 
   0.819
ACP_3437
Drug resistance transporter, EmrB/QacA subfamily; Identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
 
   0.812
ACP_1971
Drug resistance transporter, EmrB/QacA subfamily; Identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
 
   0.811
emrB
Identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
  
   0.805
ACP_1404
Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
  
   0.766
ACP_0737
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
   0.533
ACP_3451
Outer membrane efflux protein family; Identified by match to protein family HMM PF02321.
 
   0.508
ACP_1406
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
   0.500
ACP_0014
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
   0.494
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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