Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ACP_1402 | ACP_1403 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Identified by match to protein family HMM PF00857. | 0.559 |
ACP_1402 | ACP_1404 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | 0.559 |
ACP_1402 | ACP_1405 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Identified by match to protein family HMM PF00892. | 0.422 |
ACP_1403 | ACP_1402 | Identified by match to protein family HMM PF00857. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.559 |
ACP_1403 | ACP_1404 | Identified by match to protein family HMM PF00857. | Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | 0.773 |
ACP_1403 | ACP_1405 | Identified by match to protein family HMM PF00857. | Identified by match to protein family HMM PF00892. | 0.577 |
ACP_1404 | ACP_1402 | Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.559 |
ACP_1404 | ACP_1403 | Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | Identified by match to protein family HMM PF00857. | 0.773 |
ACP_1404 | ACP_1405 | Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | Identified by match to protein family HMM PF00892. | 0.568 |
ACP_1405 | ACP_1402 | Identified by match to protein family HMM PF00892. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.422 |
ACP_1405 | ACP_1403 | Identified by match to protein family HMM PF00892. | Identified by match to protein family HMM PF00857. | 0.577 |
ACP_1405 | ACP_1404 | Identified by match to protein family HMM PF00892. | Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | 0.568 |