Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ACP_1473 | ACP_1474 | Putative membrane protein. | Two-component hybrid sensor and regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF01627. | 0.522 |
ACP_1473 | ACP_1475 | Putative membrane protein. | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | 0.522 |
ACP_1473 | ACP_1797 | Putative membrane protein. | Conserved hypothetical protein; Identified by similarity to PIR:E83395; match to protein family HMM PF04237. | 0.403 |
ACP_1473 | ACP_2219 | Putative membrane protein. | Identified by match to protein family HMM PF00892. | 0.400 |
ACP_1474 | ACP_1473 | Two-component hybrid sensor and regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF01627. | Putative membrane protein. | 0.522 |
ACP_1474 | ACP_1475 | Two-component hybrid sensor and regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF01627. | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | 0.804 |
ACP_1475 | ACP_1473 | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | Putative membrane protein. | 0.522 |
ACP_1475 | ACP_1474 | DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. | Two-component hybrid sensor and regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF01627. | 0.804 |
ACP_1797 | ACP_1473 | Conserved hypothetical protein; Identified by similarity to PIR:E83395; match to protein family HMM PF04237. | Putative membrane protein. | 0.403 |
ACP_2219 | ACP_1473 | Identified by match to protein family HMM PF00892. | Putative membrane protein. | 0.400 |