STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_1484Putative lipoprotein. (736 aa)    
Predicted Functional Partners:
ACP_0291
NADH dehydrogenase I, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
    0.793
ACP_1574
IPT/TIG domain protein; Identified by match to protein family HMM PF01833.
  
     0.765
ACP_3384
Glycosyl hydrolase, family 52.
  
     0.758
ACP_1085
Hypothetical protein; Identified by glimmer; putative.
  
     0.753
ACP_2797
TonB-dependent receptor; Identified by match to protein family HMM PF00593.
  
     0.752
ACP_0011
Fusaric acid resistance domain protein; Identified by similarity to SP:P32715.
  
     0.751
ACP_0984
Conserved hypothetical protein.
  
     0.751
ACP_0537
Hypothetical protein; Identified by glimmer; putative.
  
     0.738
ACP_1123
Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family.
    
   0.733
ACP_3220
Hypothetical protein; Identified by glimmer; putative.
  
     0.726
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.