STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_1688Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. (497 aa)    
Predicted Functional Partners:
ACP_0198
Conserved hypothetical protein; Identified by similarity to GB:BAD63650.1.
  
 
 0.909
aldH
NADP-dependent fatty aldehyde dehydrogenase; Identified by similarity to SP:Q56694; match to protein family HMM PF00171.
  
  
 
0.905
ACP_1336
Proline dehydrogenase; Identified by match to protein family HMM PF01619.
 
 0.898
acsA
acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.686
adh
Alcohol dehydrogenase, zinc-containing; Identified by similarity to SP:P42327; match to protein family HMM PF00107; match to protein family HMM PF08240.
 
 
 
 0.526
ACP_2686
Pyruvate ferrodoxin oxidoreductase; Identified by similarity to GB:CAA70873.1; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
   
 
 0.473
gltB
NADPH-dependent glutamate synthetase; Identified by similarity to SP:Q05755; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
  
 0.467
ACP_3156
Putative pyruvate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780.
  
 
 0.423
ACP_1687
Cell shape determining protein MreB; Identified by similarity to SP:P13519; match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904.
     
 0.421
ACP_1004
Homocysteine S-methyltransferase/methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574.
  
 
 0.417
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.