Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP_2005Glycosyl tranferase, homolog; Identified by similarity to GB:CAH34282.1; match to protein family HMM TIGR03472. (392 aa)    
Predicted Functional Partners:
ACP_0805
Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535; match to protein family HMM TIGR03472.
  
  
 
0.917
ACP_1042
Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535.
  
  
 
0.917
ACP_0072
Putative beta-galactosidase; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
     
  0.900
ACP_1970
O-glycosyl hydrolase, family 30; Identified by match to protein family HMM PF02055; Belongs to the glycosyl hydrolase 30 family.
     
  0.900
ACP_3030
Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471.
 
     0.781
ACP_0818
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; match to protein family HMM PF08659; match to protein family HMM TIGR03466.
  
    0.727
shc
Squalene-hopene cyclase; Identified by similarity to SP:P33247; similarity to GB:BAA25185.1; match to protein family HMM PF00432; match to protein family HMM TIGR01507; match to protein family HMM TIGR01787.
 
     0.717
ACP_3330
Radical SAM domain protein; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03470.
  
     0.707
ACP_0759
Conserved hypothetical protein; Identified by similarity to GB:AAV89598.1; match to protein family HMM PF04794.
 
   
 0.703
ACP_2007
Efflux ABC transporter, macrolide exporter (MacB) family, permease protein; Identified by match to protein family HMM PF02687.
       0.676
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.