ACP_2671 protein (Acidobacterium capsulatum)

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ACP_2671

RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (208 aa)

Predicted Functional Partners:

ACP_2670

0.826

ACP_2672

0.778

ACP_3216

0.752

ACP_2673

0.595

ACP_2674

0.567

ACP_1673

0.474

ACP_1727

0.463

ACP_1792

0.463

ACP_2458

0.463

ACP_3397

0.463

Your Current Organism:

Acidobacterium capsulatum

NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ACP_1673	ACP_2671	Ribonuclease, Rne/Rng family, insertion; Identified by match to protein family HMM TIGR00757.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.474
ACP_1673	ACP_3216	Ribonuclease, Rne/Rng family, insertion; Identified by match to protein family HMM TIGR00757.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.470
ACP_1727	ACP_2671	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.463
ACP_1727	ACP_3216	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.459
ACP_1792	ACP_2671	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.463
ACP_1792	ACP_3216	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.459
ACP_2458	ACP_2671	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.463
ACP_2458	ACP_3216	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.459
ACP_2670	ACP_2671	Conserved domain protein; Identified by similarity to GB:BAC12185.1.	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.826
ACP_2670	ACP_2672	Conserved domain protein; Identified by similarity to GB:BAC12185.1.	Identified by match to protein family HMM PF07681.	0.784
ACP_2670	ACP_2673	Conserved domain protein; Identified by similarity to GB:BAC12185.1.	Hypothetical protein; Identified by glimmer; putative.	0.603
ACP_2670	ACP_2674	Conserved domain protein; Identified by similarity to GB:BAC12185.1.	Conserved hypothetical protein; Identified by similarity to GB:CAF24589.1; match to protein family HMM PF05114; Belongs to the UPF0276 family.	0.585
ACP_2671	ACP_1673	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Ribonuclease, Rne/Rng family, insertion; Identified by match to protein family HMM TIGR00757.	0.474
ACP_2671	ACP_1727	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.	0.463
ACP_2671	ACP_1792	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.	0.463
ACP_2671	ACP_2458	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659.	0.463
ACP_2671	ACP_2670	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved domain protein; Identified by similarity to GB:BAC12185.1.	0.826
ACP_2671	ACP_2672	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Identified by match to protein family HMM PF07681.	0.778
ACP_2671	ACP_2673	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Identified by glimmer; putative.	0.595
ACP_2671	ACP_2674	RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Conserved hypothetical protein; Identified by similarity to GB:CAF24589.1; match to protein family HMM PF05114; Belongs to the UPF0276 family.	0.567

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