STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_2730Efflux ABC transporter, peptide-1 exporter (Pep1E) family, permease/ATP-binding protein; Identified by match to protein family HMM PF00005. (620 aa)    
Predicted Functional Partners:
ACP_2704
AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF01553.
  
 
 0.829
cgs
Cyclic beta 1-2 glucan synthetase; Identified by similarity to GB:AAC34747.1.
       0.778
ACP_1162
Nonribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733.
  
 
 0.562
ACP_0652
ATPase, AAA family; Identified by match to protein family HMM PF00004.
 
 
 0.494
ACP_1157
Polyketide synthase peptide synthetase fusion protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00202; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM TIGR01733.
  
 
 0.471
cysK2
Cysteine synthase A; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139.
  
  
 0.457
cysE
Serine O-acetyltransferase; Identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172.
       0.430
ACP_0565
Conserved hypothetical protein.
  
     0.405
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
Server load: low (18%) [HD]