STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldHNADP-dependent fatty aldehyde dehydrogenase; Identified by similarity to SP:Q56694; match to protein family HMM PF00171. (535 aa)    
Predicted Functional Partners:
ACP_0198
Conserved hypothetical protein; Identified by similarity to GB:BAD63650.1.
 
 
 0.943
ACP_1688
Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.905
ACP_0328
2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit family protein; Identified by match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR03710.
   
 0.843
sucA
2-oxoglutarate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239.
   
 
 0.827
icd2
Isocitrate dehydrogenase; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR02924.
   
 0.817
ACP_1462
Putative isocitrate dehydrogenase, NAD-dependent; Identified by match to protein family HMM PF00180.
   
 0.817
icd1
Isocitrate dehydrogenase, NADP-dependent; Identified by similarity to SP:P50214; match to protein family HMM PF00180; match to protein family HMM TIGR00183.
   
 
 0.811
ACP_0329
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; Identified by similarity to GB:BAA10899.1; match to protein family HMM PF02775.
     
 0.805
ACP_3275
Putative proline racemase; Identified by similarity to GB:CAB71312.1; match to protein family HMM PF05544; Belongs to the proline racemase family.
 
 
   0.745
dapA2
Dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701; Belongs to the DapA family.
 
  
 0.639
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.