STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_3203Plasmid stabilization system protein, RelE/ParE family; Identified by match to protein family HMM PF05016. (104 aa)    
Predicted Functional Partners:
ACP_2880
Ribbon-helix-helix protein, copG family; Identified by match to protein family HMM PF01402.
 
 
 0.909
bxlB3
Conserved hypothetical protein; Identified by similarity to GB:BAC91445.1.
  
 
 0.887
ACP_2186
Putative addiction module antidote protein, CC2985 family; Identified by match to protein family HMM PF03693; match to protein family HMM TIGR02606.
 
 
 0.715
ACP_1297
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.571
ACP_3420
Addiction module antitoxin, RelB/DinJ family; Identified by similarity to SP:Q47150; similarity to GB:CAA26250.1; match to protein family HMM PF04221; match to protein family HMM TIGR02384.
 
 
   0.453
ACP_2881
Plasmid stabilization system protein, RelE/ParE family; Identified by match to protein family HMM PF05016.
  
     0.423
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.