STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_3207Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434. (878 aa)    
Predicted Functional Partners:
ACP_2502
Efflux ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
   0.818
ACP_2501
Efflux transporter, MFP subunit; Identified by match to protein family HMM TIGR01730.
  
    0.815
ACP_2504
Efflux ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
   0.808
ACP_1370
Efflux ABC transporter, macrolide exporter (MacB) family, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
   0.780
ACP_0907
ABC-type transport system, involved in lipoprotein release, permease components; Identified by match to protein family HMM PF02687.
  
     0.748
ACP_1853
Permease subunit of a ABC-type transport system involved in lipoprotein release, putative; Identified by match to protein family HMM PF02687.
  
    0.744
ACP_0883
ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
    0.733
ACP_1369
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.
  
    0.727
ACP_2507
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
  
     0.709
ACP_0524
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.695
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.