STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP_3208Conserved hypothetical protein; Identified by similarity to GB:CAD48015.1. (229 aa)    
Predicted Functional Partners:
ACP_3210
Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027.
 
     0.793
ACP_3209
Conserved hypothetical protein; Identified by similarity to GB:AAK24668.1.
 
    
0.675
ACP_2148
Conserved domain protein; Identified by similarity to GB:BAC09164.1; match to protein family HMM PF08447.
  
 
 0.475
ACP_2712
Two-component sensor histidine kinase all1088; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518.
  
 0.416
ACP_3462
Sensory transduction histidine kinase; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518.
  
 0.416
Your Current Organism:
Acidobacterium capsulatum
NCBI taxonomy Id: 240015
Other names: A. capsulatum ATCC 51196, Acidobacterium capsulatum ATCC 51196, Acidobacterium capsulatum str. ATCC 51196, Acidobacterium capsulatum strain ATCC 51196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.