STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_000473NF-kappa-B inhibitor zeta I-kappa-B-zeta. (373 aa)    
Predicted Functional Partners:
D9C73_027570
annotation not available
   
0.880
D9C73_028155
NF-kappa-B p100 subunit DNA-binding factor KBF2.
   
0.880
D9C73_015092
Transcription factor.
   
 0.865
D9C73_027404
Transcription factor p65.
   
 0.865
D9C73_020424
NF-kappa-B inhibitor alpha I-kappa-B-alpha.
  
0.788
D9C73_009971
NF-kappa-B inhibitor alpha I-kappa-B-alpha.
  
0.787
D9C73_027817
Tumor necrosis factor TNF-alpha.
   
 0.703
D9C73_010360
NF-kappa-B inhibitor epsilon.
   
0.668
D9C73_009590
NF-kappa-B inhibitor epsilon.
   
0.668
D9C73_010064
Ankyrin repeat domain-containing protein 6.
   
0.668
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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