STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_000532Importin-5. (1063 aa)    
Predicted Functional Partners:
D9C73_012082
Adhesion G-protein coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.967
D9C73_026615
Importin subunit beta-1.
   
 
0.901
D9C73_002873
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.892
D9C73_011696
Sentrin-specific protease 1.
    
 
 0.889
D9C73_020909
Uncharacterized protein.
    
 
 0.889
D9C73_003357
THO complex subunit 4-A.
   
   0.862
D9C73_026030
THO complex subunit 4-A.
   
   0.862
D9C73_017523
Nuclear pore complex protein.
   
 
 0.853
D9C73_000494
Importin-5.
  
 
0.834
D9C73_022097
Importin-4.
   
 
0.830
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.