STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_000761ADP-ribosylation factor-like protein 4C; Belongs to the small GTPase superfamily. Arf family. (192 aa)    
Predicted Functional Partners:
D9C73_004001
Intersectin-2 EH domain and SH3 domain regulator of endocytosis 2.
    
 0.874
D9C73_004007
Intersectin-2 EH domain and SH3 domain regulator of endocytosis 2.
    
 0.874
D9C73_009375
Intersectin-2 SH3 domain-containing protein 1B SH3P18 SH3P18-like WASP-associated protein.
    
 0.874
D9C73_009849
Intersectin-2 SH3 domain-containing protein 1B SH3P18 SH3P18-like WASP-associated protein.
    
 0.874
D9C73_028082
Muscle M-line assembly protein unc-89.
   
 0.844
D9C73_024971
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.805
D9C73_019375
Intersectin-1 SH3 domain-containing protein 1A SH3P17.
    
 0.772
D9C73_019358
Intersectin-1 SH3 domain-containing protein 1A SH3P17.
    
 0.772
D9C73_019483
Intersectin-1 SH3 domain-containing protein 1A SH3P17.
    
 0.772
D9C73_019376
Intersectin-1 SH3 domain-containing protein 1A SH3P17.
    
 0.772
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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