STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_003685Histidine decarboxylase. (656 aa)    
Predicted Functional Partners:
D9C73_007305
Tyrosine 3-monooxygenase.
   
 0.903
D9C73_024847
Tyrosine 3-monooxygenase.
   
 0.903
D9C73_020008
Delta-1-pyrroline-5-carboxylate synthase.
    
 0.901
D9C73_023807
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.901
D9C73_003800
Bifunctional glutamate/proline--tRNA ligase.
    
 0.890
D9C73_000777
Amine oxidase.
    
 0.882
D9C73_019012
Amine oxidase.
    
 0.882
D9C73_005407
Catechol O-methyltransferase.
  
 
 0.881
D9C73_022172
Amine oxidase.
     
 0.873
D9C73_025480
Amine oxidase.
     
 0.873
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.