STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_005307Metalloproteinase inhibitor 4. (187 aa)    
Predicted Functional Partners:
D9C73_011621
Matrix metalloproteinase-9.
    
 0.799
D9C73_000332
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
    
 0.780
D9C73_013489
Matrix metalloproteinase-14.
    
 0.721
D9C73_004380
Matrix metalloproteinase-15.
    
 0.721
D9C73_015276
Matrix metalloproteinase-28.
    
 0.712
D9C73_017797
Collagenase 3.
    
 0.706
D9C73_017919
Collagenase 3.
    
 0.706
D9C73_019936
A2-like protein Group XIII secretory phospholipase.
    
 0.638
D9C73_022078
Matrix metalloproteinase-16.
    
 0.623
D9C73_003878
72 kDa type IV collagenase.
    
 0.614
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.